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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5756270_5757362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5756270 - 5757362

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ACTATGATAACT

Flanking Amino Acid:

VQPRVVVHPQAGKETASAHS

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

79.7

0.67

0.9

31.7

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

46.2

-0.2

2.3

67.49

43.2

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207