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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5777919_5778575_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5777919 - 5778575

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GACCACTGAACA

Flanking Amino Acid:

EDAVMFWINKVNEHLKDIME

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

0.3

34.1

Major PPT

82.4

0.73

0.9

73.6

41.8

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

49.3

-0

1.7

57.47

40.8

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207