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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5778738_5807620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5778738 - 5807620

Intron Length:

28883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

AAGTAAGTAAGT

Flanking Amino Acid:

RDLHKKPIQMSAHLAMIDTL

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

84.8

0.78

0.7

80.7

24.5

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

39.8

-0.6

2.4

57.73

44.5

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207