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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5807881_5818953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5807881 - 5818953

Intron Length:

11073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTGGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTATTCATTT

Flanking Amino Acid:

AWLVAKAFGTENVPEELREP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.2

0.7

0.9

80.6

31.5

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

50.9

0.11

1.9

76.98

Associated Gene:

Gene:

CAMSAP2

Ensembl Gene ID:

ENSAPLG00000013256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033899

5742943 - 5819332

76390

ENSAPLT00000013823

5743126 - 5819332

76207