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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5884431_5885130_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
5884431 - 5885130

Intron Length:
700

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTACGGGTT

5'SS Class:
major

3'SS Sequence:
TTTGTTTATCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
CTTTGTTTATCC

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.2
0.26
1.2
61.3
43.3

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
84.4
0.77
0.9
77.7
40.7

Minor 5ss
37
-1.5
4
64.5
46.9

Minor BPS
54.4
0.12
2
69.42
42.8

Associated Gene:

Gene:
KIF14

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5884279 - 5908659
24381

5884279 - 5908659
24381

5884279 - 5908659
24381