Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_588766_594885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

588766 - 594885

Intron Length:

6120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TTTTCTTTTTCT

Flanking Amino Acid:

SRNIYIKVGEDQVFPPSCNI

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

91.4

0.93

0.6

84.6

30.3

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

TGFBR3

Ensembl Gene ID:

ENSAPLG00000014247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035945

555729 - 680318

124590

ENSAPLT00000014882

559197 - 680502

121306