About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_5888996_5889579_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
5888996 - 5889579

Intron Length:
584

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTAAGTCTT

5'SS Class:
major

3'SS Sequence:
TCCCCCTCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTGAA

U12 Branch Point Sequence:
TGAATACAAACT

Flanking Amino Acid:
VLGPYVEDLTVNVVSSYSDI

Intron Amino Acid Position:
526

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1.1
74.7
41.5

Major BPS
73.3
0.58
0.9
63.4
35.6

Major PPT
74.4
0.55
0.7
69.2
24.6

Minor 5ss
42.1
-0.9
3.1
60.2
44.1

Minor BPS
41.5
-0.5
2.1
60.31
42.4

Associated Gene:

Gene:
KIF14

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5884279 - 5908659
24381

5884279 - 5908659
24381

5884279 - 5908659
24381