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Intron Name: Anas_platyrhynchos_platyrhynchos_8_5939134_5942921_F

Intron Information:

Intron Rank:

145214

Intron Class:

major

Intron Phase:

Intron Coordinates:

5939134 - 5942921

Intron Length:

3788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCACA

5'SS Class:

major

3'SS Sequence:

TCCTGTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AAAATCTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.6

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

74.1

0.54

68.2

42.3

Minor 5ss

42.1

-0.9

2.8

54.7

42.4

Minor BPS

51.1

0.02

1.4

56.61

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027762

5938981 - 5947792

8812