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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6008317_6013105_F

Intron Information:

Intron Rank:

142185

Intron Class:

major

Intron Phase:

Intron Coordinates:

6008317 - 6013105

Intron Length:

4789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTAATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCCTCATGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

0.72

0.9

76.6

37.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

55.7

0.16

2.1

74.6

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037969

5985275 - 6015254

29980