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Intron Name: Anas_platyrhynchos_platyrhynchos_8_607230_630296_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
607230 - 630296

Intron Length:
23067

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAGGGG

5'SS Class:
major

3'SS Sequence:
TATTTCTCTGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATCAT

U12 Branch Point Sequence:
TTCCACTTAATC

Flanking Amino Acid:
EEGLGHHEREVTLHLNPISS

Intron Amino Acid Position:
82

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
61.1
43.7

Major BPS
80.4
0.76
1
80.3
31.8

Major PPT
82.7
0.74
0.7
78.3
30.1

Minor 5ss
28
-2.5
3.5
37.8
47.1

Minor BPS
66.5
0.5
1.5
72.87
38.1

Associated Gene:

Gene:
TGFBR3

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

555729 - 680318
124590

559197 - 680502
121306