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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6108014_6109448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6108014 - 6109448

Intron Length:

1435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GTAACTCTAATT

Flanking Amino Acid:

EQGQMPENMQVSQFKMVNYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

82.2

0.8

0.9

81.6

Major PPT

82.4

0.73

0.7

75.4

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

54.6

0.22

1.7

71.3

39.5

Associated Gene:

Gene:

NR5A2

Ensembl Gene ID:

ENSAPLG00000009302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046231

6032658 - 6119317

86660

ENSAPLT00000026670

6032658 - 6110833

78176