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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6109587_6119253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6109587 - 6119253

Intron Length:

9667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCGTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

TCCAGCTAAATC

Flanking Amino Acid:

ESIKHGLTSVGAGVADGHGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

81.8

31.8

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

66.2

0.37

43.3

Minor 5ss

36.5

-1.5

2.7

46.6

41.8

Minor BPS

45.8

-0.3

2.1

44.6

Associated Gene:

Gene:

NR5A2

Ensembl Gene ID:

ENSAPLG00000009302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046231

6032658 - 6119317

86660