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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6126281_6172345_F

Intron Information:

Intron Rank:

125197

Intron Class:

major

Intron Phase:

Intron Coordinates:

6126281 - 6172345

Intron Length:

46065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.5

0.57

71.2

43.2

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

67.1

0.53

1.5

78.19

31.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043855

6125725 - 6172973

47249