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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6225960_6227248_F

Intron Information:

Intron Rank:

148090

Intron Class:

major

Intron Phase:

Intron Coordinates:

6225960 - 6227248

Intron Length:

1289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTCTGTGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

89.3

0.88

0.7

84.9

29.9

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

46.8

-0.1

2.4

73.74

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031513

6225708 - 6232819

7112