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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6246431_6249251_R

Intron Information:

Intron Rank:

148333

Intron Class:

major

Intron Phase:

Intron Coordinates:

6246431 - 6249251

Intron Length:

2821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTTTTGCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

43.2

-0.4

2.4

70.72

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047277

6243273 - 6249715

6443

ENSAPLT00000017498

6244126 - 6256547

12422