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Intron Name: Anas_platyrhynchos_platyrhynchos_8_630482_666574_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
630482 - 666574

Intron Length:
36093

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTGGC

5'SS Class:
strong_major

3'SS Sequence:
TAATCTTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTATAAT

U12 Branch Point Sequence:
CTTTCTCTAAAT

Flanking Amino Acid:
FALILCFAAAGPVPRSECVL

Intron Amino Acid Position:
20

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
1
73.2
37.5

Major BPS
70.1
0.5
1.3
72.3
40.4

Major PPT
79.6
0.67
0.9
73.9
36.1

Minor 5ss
31.6
-2.1
3.4
43.4
44.3

Minor BPS
62.7
0.48
1.8
81.82
39.6

Associated Gene:

Gene:
TGFBR3

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

555729 - 680318
124590

559197 - 680502
121306