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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6665380_6671822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6665380 - 6671822

Intron Length:

6443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GCTTTCTTACAT

Flanking Amino Acid:

PLPSDHYSEELRQLVNMCIN

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

80.1

0.68

0.7

73.6

31.4

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

57.9

0.33

1.8

73.29

43.5

Associated Gene:

Gene:

NEK7

Ensembl Gene ID:

ENSAPLG00000022812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029816

6662500 - 6723980

61481