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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6685551_6699123_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6685551 - 6699123

Intron Length:

13573

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAA|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TATTGACTATCT

Flanking Amino Acid:

DAGDLSRMIKHFKKQKRLIP

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

50.6

0.01

3.2

88.9

28.1

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

44.1

-0.3

2.4

71.37

44.8

Associated Gene:

Gene:

NEK7

Ensembl Gene ID:

ENSAPLG00000022812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029816

6662500 - 6723980

61481