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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6772759_6777259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6772759 - 6777259

Intron Length:

4501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TGATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTAGTTTAATA

Flanking Amino Acid:

KTGLTKRVLQGEQIMGHYSQ

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.9

0.76

0.8

81.4

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

57.6

0.23

1.8

68.47

38.3

Associated Gene:

Gene:

LHX9

Ensembl Gene ID:

ENSAPLG00000008320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028796

6772572 - 6784122

11551