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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6783344_6784740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6783344 - 6784740

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

GGTTGTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CCCGTGTGACCC

Flanking Amino Acid:

KGGQMNGRETNMPPLSPEKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.7

46.6

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

0.61

69.6

41.6

Minor 5ss

32.1

-2

3.1

40.5

45.4

Minor BPS

35.4

-1.1

2.1

37.1

41.4

Associated Gene:

Gene:

LHX9

Ensembl Gene ID:

ENSAPLG00000008320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008673

6775653 - 6785049

9397

ENSAPLT00000045715

6775653 - 6789815

14163