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Intron Name: Anas_platyrhynchos_platyrhynchos_8_6789472_6789717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6789472 - 6789717

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGATTT

5'SS Class:

strong_major

3'SS Sequence:

GATCCTCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

77.6

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.27

54.8

Minor 5ss

-1.5

3.5

55.2

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

LHX9

Ensembl Gene ID:

ENSAPLG00000008320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045715

6775653 - 6789815

14163