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Intron Name: Anas_platyrhynchos_platyrhynchos_8_7029140_7032623_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7029140 - 7032623

Intron Length:

3484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

CGCTAATCCCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTAAT

U12 Branch Point Sequence:

TTTCCCGTATCG

Flanking Amino Acid:

RPYTGPHCSAEYIPGRFGSE

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

0.42

1.2

67.3

37.8

Major PPT

53.1

0.07

1.1

48.9

38.4

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

51.3

-0.1

2.3

68.82

44.4

Associated Gene:

Gene:

CRB1

Ensembl Gene ID:

ENSAPLG00000007783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008089

6998877 - 7096457

97581