Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_709497_711558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

709497 - 711558

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGAACC

5'SS Class:

major

3'SS Sequence:

TCAAAAACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CTTTCAAAAACT

Flanking Amino Acid:

PVDAAALNLPDYYNIIKKPM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

65.9

38.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

61.3

0.25

51.8

41.3

Minor 5ss

37.7

-1.4

55.4

41.3

Minor BPS

49.8

0.07

2.2

78.09

43.9

Associated Gene:

Gene:

BRDT

Ensembl Gene ID:

ENSAPLG00000014456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015077

705153 - 730839

25687