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Intron Name: Anas_platyrhynchos_platyrhynchos_8_7114316_7114418_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
7114316 - 7114418

Intron Length:
103

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGCAGC

5'SS Class:
major

3'SS Sequence:
CATTCTTTTGTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTAAA

U12 Branch Point Sequence:
AATGCCGTTACT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
67.3
44.3

Major BPS
70.1
0.5
1.1
69.9
35.3

Major PPT
81.6
0.71
0.8
77
31.2

Minor 5ss
38.7
-1.3
3.1
52.2
44.6

Minor BPS
48.1
-0
2.4
71.2
45.6

Associated Gene:

Gene:
ZBTB41

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7113899 - 7127544
13646