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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_7115655_7116683_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
7115655 - 7116683
Intron Length:
1029

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAAGAGCA
5'SS Class:
strong_major
3'SS Sequence:
TTCTGTTGTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TACTAAC
U12 Branch Point Sequence:
TTTATACTAACA
Flanking Amino Acid:
PKCDKKFDRIGKYESHTRVH
Intron Amino Acid Position:
374

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.6
0.96
0.8
77.8
30
Major BPS
76.8
0.67
0.9
75.9
25
Major PPT
76.3
0.59
0.9
72.8
37.5
Minor 5ss
30.7
-2.2
3.3
39.5
45.9
Minor BPS
53.9
0.12
2
74.09
36.8

Associated Gene:

Gene:
ZBTB41
Ensembl Gene ID:
ENSAPLG00000007731
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000043683
7113899 - 7127544
13646
ENSAPLT00000008030
7113899 - 7127544
13646