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Intron Name: Anas_platyrhynchos_platyrhynchos_8_7121127_7122631_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7121127 - 7122631

Intron Length:
1505

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
CTTTGTTAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTAAA

U12 Branch Point Sequence:
TTAAAATTAAAT

Flanking Amino Acid:
CFICGKSVRERTTLKEHLRI

Intron Amino Acid Position:
559

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.6
0.82
0.9
81.1
32.8

Major BPS
73.8
0.59
0.9
74
26.8

Major PPT
73.5
0.53
1
69.8
39.5

Minor 5ss
35.6
-1.6
3.1
50.4
45.6

Minor BPS
50.9
0.11
1.9
74.05
41.4

Associated Gene:

Gene:
ZBTB41

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7113899 - 7127544
13646

7113899 - 7127544
13646