Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_7142456_7142982_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7142456 - 7142982

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TAGTATTTAAGG

Flanking Amino Acid:

CLFCKDAEFKTSKDILLAIS

Intron Amino Acid Position:

954

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

79.5

0.73

0.9

36.9

Major PPT

75.5

0.57

1.1

79.2

38.4

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

50.7

-0.1

1.9

57.14

44.4

Associated Gene:

Gene:

ASPM

Ensembl Gene ID:

ENSAPLG00000007025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007340

7133347 - 7160083

26737