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Intron Name: Anas_platyrhynchos_platyrhynchos_8_7179912_7183931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7179912 - 7183931

Intron Length:

4020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTATAATTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTATAATT

Flanking Amino Acid:

LCWVYCTAERACEQSPPRRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.2

0.61

0.9

74.8

39.6

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

64.3

0.53

1.5

81.08

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047333

7174270 - 7183992

9723