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Intron Name: Anas_platyrhynchos_platyrhynchos_8_723020_727552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

723020 - 727552

Intron Length:

4533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTCATCA

Flanking Amino Acid:

PPEQNAQSPSGYCNTHNGQN

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

32.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.8

0.87

0.7

90.1

24.5

Minor 5ss

40.6

-1

3.1

57.9

46.2

Minor BPS

58.5

0.26

1.8

74.83

37.1

Associated Gene:

Gene:

BRDT

Ensembl Gene ID:

ENSAPLG00000014456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015077

705153 - 730839

25687