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Intron Name: Anas_platyrhynchos_platyrhynchos_8_745624_748143_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
745624 - 748143

Intron Length:
2520

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
ATTTTTGTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TCATTTTTAATT

Flanking Amino Acid:
VNFPHPSVFTEYILRHPSQL

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.9
1.06
0.6
93
14.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
87.1
0.83
0.8
85.1
34.9

Minor 5ss
40.7
-1
3
57.8
46.8

Minor BPS
72.8
0.79
1.1
79.64
37.1

Associated Gene:

Gene:
EPHX4

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

737123 - 752687
15565