Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_748248_749184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

748248 - 749184

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTAGATA

Flanking Amino Acid:

EFMFTVNDFKVLKSLFTSQA

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.1

0.79

0.7

80.9

24.2

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

60.3

0.32

1.6

71.77

34.5

Associated Gene:

Gene:

EPHX4

Ensembl Gene ID:

ENSAPLG00000014785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015408

737123 - 752687

15565