Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_767535_768709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

767535 - 768709

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATATGTC

5'SS Class:

major

3'SS Sequence:

GCTTTCTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATT

Flanking Amino Acid:

ILDFPDEVDVGRMLGIADMY

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

65.6

38.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.8

0.67

0.8

77.7

31.1

Minor 5ss

42.2

-0.9

3.2

51.7

45.7

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

BTBD8

Ensembl Gene ID:

ENSAPLG00000014887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015518

753010 - 786511

33502

ENSAPLT00000017880

753010 - 786511

33502