Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_780439_781001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

780439 - 781001

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

AATTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TATGCTTGAAAA

Flanking Amino Acid:

TELEANATTSSLTKKSTGKG

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

0.75

78.6

Major PPT

83.8

0.76

0.8

77.8

35.5

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

55.3

0.16

1.6

66.78

39.3

Associated Gene:

Gene:

BTBD8

Ensembl Gene ID:

ENSAPLG00000014887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017880

753010 - 786511

33502

ENSAPLT00000015518

753010 - 786511

33502