Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_784686_786041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

784686 - 786041

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAC

5'SS Class:

strong_major

3'SS Sequence:

TGAATTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GTATTGTGAATT

Flanking Amino Acid:

TEFANTDLLPGDIDDYDTMA

Intron Amino Acid Position:

1619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

71.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

74.4

0.55

70.7

Minor 5ss

37.1

-1.5

3.3

49.8

46.8

Minor BPS

48.9

-0

2.1

70.06

Associated Gene:

Gene:

BTBD8

Ensembl Gene ID:

ENSAPLG00000014887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017880

753010 - 786511

33502

ENSAPLT00000015518

753010 - 786511

33502