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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8221818_8222560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8221818 - 8222560

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGCGT

5'SS Class:

major

3'SS Sequence:

TCCTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACATTTTTATTT

Flanking Amino Acid:

ASTVAAVMCMVVARTEKDSH

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

62.2

43.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.7

83.4

24.9

Minor 5ss

27.2

-2.6

3.3

35.4

43.2

Minor BPS

53.9

0.2

1.5

65.97

39.6

Associated Gene:

Gene:

RO60

Ensembl Gene ID:

ENSAPLG00000003121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003187

8219675 - 8225664

5990