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Intron Name: Anas_platyrhynchos_platyrhynchos_8_832748_834273_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
832748 - 834273

Intron Length:
1526

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGAGGAAG

5'SS Class:
major

3'SS Sequence:
TAATTTATAATAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CGCTCCTTAATT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.62
1
65.6
41.7

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
67.7
0.4
1
63.9
41.1

Minor 5ss
25.7
-2.8
2.9
22.3
37.3

Minor BPS
76.2
0.9
1.2
80.32
42.1

Associated Gene:

Gene:
GLMN

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

812225 - 834431
22207