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Intron Name: Anas_platyrhynchos_platyrhynchos_8_840932_842415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

840932 - 842415

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTGTTAAAG

Flanking Amino Acid:

QAEELLSKDKDDEQQDLTFP

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.52

66.4

43.3

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

49.1

-0.2

2.2

58.42

42.8

Associated Gene:

Gene:

RPAP2

Ensembl Gene ID:

ENSAPLG00000015165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015834

834452 - 870115

35664