Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_8459533_8460255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8459533 - 8460255

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTACCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CTTTCTTTACCC

Flanking Amino Acid:

EKPEKPAKAQKPSPEEALQW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

40.1

Major BPS

0.6

65.6

41.1

Major PPT

76.1

0.59

0.8

66.7

35.3

Minor 5ss

28.4

-2.5

3.1

31.4

36.6

Minor BPS

69.8

0.6

1.6

77.59

Associated Gene:

Gene:

RGS5

Ensembl Gene ID:

ENSAPLG00000016064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016758

8458874 - 8463630

4757