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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8468281_8469622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8468281 - 8469622

Intron Length:

1342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CCTCCTGCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTCGTTTCATCC

Flanking Amino Acid:

LGTTRSKAGAGEVEKLVQAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

64.9

0.34

35.5

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

-0.3

1.8

57.16

42.4

Associated Gene:

Gene:

HTATIP2

Ensembl Gene ID:

ENSAPLG00000016049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016736

8467462 - 8471113

3652