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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8469958_8471075_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8469958 - 8471075

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTGGGTGCC

5'SS Class:

weak_major

3'SS Sequence:

GCGGCGGTGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

CCCTCGCTCATG

Flanking Amino Acid:

RRRPPNRLRESGAGSCFVLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

54.4

38.5

Major BPS

67.4

0.43

1.2

38.9

Major PPT

49.6

-0

1.1

41.7

43.1

Minor 5ss

28.6

-2.4

3.3

35.5

35.3

Minor BPS

36.8

-1.1

2.5

38.6

45.3

Associated Gene:

Gene:

HTATIP2

Ensembl Gene ID:

ENSAPLG00000016049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016736

8467462 - 8471113

3652