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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8478238_8480391_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8478238 - 8480391

Intron Length:

2154

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCGAGTGCC

5'SS Class:

weak_major

3'SS Sequence:

ATGACAACTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

ACCTTCATGACA

Flanking Amino Acid:

GVCGGHQELQVFSSTCAFSC

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.24

1.4

71.5

33.4

Major BPS

0.62

1.1

77.2

Major PPT

0.29

42.8

Minor 5ss

20.2

-3.4

3.8

27.7

36.2

Minor BPS

52.4

0.07

1.6

60.76

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013923

8477702 - 8486379

8678