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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8480505_8480633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8480505 - 8480633

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGCTG

5'SS Class:

major

3'SS Sequence:

TTCTCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAA

U12 Branch Point Sequence:

TCTGCTTGAAGC

Flanking Amino Acid:

TWSGDNPQCKAITCPMLRAP

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

57.6

46.8

Major BPS

56.9

0.17

1.3

51.3

44.2

Major PPT

86.3

0.82

0.7

80.9

24.2

Minor 5ss

32.3

-2

3.7

46.2

49.1

Minor BPS

49.8

-0

1.9

62.35

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013923

8477702 - 8486379

8678