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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8481461_8481609_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8481461 - 8481609

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTGCTG

5'SS Class:

weak_major

3'SS Sequence:

CCAGAGCATGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

GGCTCCAGAGCA

Flanking Amino Acid:

PQCKGRAAGKEMNCSHLHEN

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.2

45.1

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

43.6

-0.3

1.7

39.1

38.8

Minor 5ss

36.9

-1.5

3.2

47.5

Minor BPS

45.1

-0.3

1.9

55.36

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013923

8477702 - 8486379

8678