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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8485945_8486409_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8485945 - 8486409

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATGCAGA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTGTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGTTTCTGAAGC

Flanking Amino Acid:

SVDSPVQNVPDDMDFSCSSQ

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.2

54.9

43.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

86.1

0.81

0.8

80.9

31.1

Minor 5ss

47.7

-0.2

2.6

66.6

44.5

Minor BPS

60.1

0.3

1.8

71.67

39.3

Associated Gene:

Gene:

ATF6

Ensembl Gene ID:

ENSAPLG00000013950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035269

8484127 - 8555289

71163

ENSAPLT00000014559

8484127 - 8555289

71163