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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8486917_8489438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8486917 - 8489438

Intron Length:

2522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

ACATGCTAAGCA

Flanking Amino Acid:

VVNIQPAPPKGQSVVLPQPT

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

61.6

0.29

1.4

63.4

Major PPT

0.61

0.9

69.2

41.8

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

44.1

-0.4

2.2

54.21

44.4

Associated Gene:

Gene:

ATF6

Ensembl Gene ID:

ENSAPLG00000013950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035269

8484127 - 8555289

71163

ENSAPLT00000014559

8484127 - 8555289

71163