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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8515126_8541463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8515126 - 8541463

Intron Length:

26338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

CCCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GTAGATTTAACA

Flanking Amino Acid:

DTFYVVSFRRDHLLLPATTH

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.8

33.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

0.72

0.8

79.3

32.7

Minor 5ss

-0.5

2.8

54.7

43.6

Minor BPS

57.9

0.24

1.6

65.94

40.2

Associated Gene:

Gene:

ATF6

Ensembl Gene ID:

ENSAPLG00000013950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035269

8484127 - 8555289

71163

ENSAPLT00000014559

8484127 - 8555289

71163