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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8541549_8555080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8541549 - 8555080

Intron Length:

13532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

TGACTCTTGACT

Flanking Amino Acid:

SIVLPAVNINENVINGQDYE

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

73.9

0.59

65.3

41.6

Major PPT

1.1

0.4

13.8

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

68.2

0.65

1.2

78.11

37.7

Associated Gene:

Gene:

ATF6

Ensembl Gene ID:

ENSAPLG00000013950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035269

8484127 - 8555289

71163

ENSAPLT00000014559

8484127 - 8555289

71163