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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8559928_8560438_R


Intron Information:

Intron Rank:
4

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
8559928 - 8560438

Intron Length:
511

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGC|GTGAGTCGG

5'SS Class:
major

3'SS Sequence:
GTCCGTGCGGCAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CGCTGAC

U12 Branch Point Sequence:
CTCCGCTGACCC

Flanking Amino Acid:
GELENDIEEQQDELFSGDNT

Intron Amino Acid Position:
308

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.4
0.27
1.4
50.6
47.7

Major BPS
53.9
0.1
1.2
46.4
38.9

Major PPT
58.9
0.2
1.1
53.4
41.5

Minor 5ss
29.1
-2.4
2.7
27.8
36.3

Minor BPS
43
-0.5
2.1
52.11
45.1

Associated Gene:

Gene:
OLFML2B

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8558169 - 8566362
8194

8558169 - 8565743
7575