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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8560668_8561671_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8560668 - 8561671

Intron Length:
1004

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACGGCCG

5'SS Class:
major

3'SS Sequence:
CCGTCTCCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTAACAA

U12 Branch Point Sequence:
CCTCCCCTAACA

Flanking Amino Acid:
DAEAAYVHTEGKYEERFLKD

Intron Amino Acid Position:
232

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1.1
58.1
46.4

Major BPS
49.8
-0
1.1
59
36.1

Major PPT
75.6
0.58
0.8
69.2
31.4

Minor 5ss
30
-2.3
3.4
39.4
46

Minor BPS
60.9
0.34
1.8
69.55
42.5

Associated Gene:

Gene:
OLFML2B

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8558169 - 8566362
8194

8558169 - 8565743
7575