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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8578913_8579036_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8578913 - 8579036

Intron Length:
124

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGGCGGG

5'SS Class:
major

3'SS Sequence:
TCACTCTACCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTCAC

U12 Branch Point Sequence:
TTCACTCTACCC

Flanking Amino Acid:
RWMSWESILLGKFTTASDVW

Intron Amino Acid Position:
761

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.7
0.44
1.1
50.7
46.2

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
69.5
0.44
0.9
61.8
38.8

Minor 5ss
34.5
-1.8
3.6
43.1
46.4

Minor BPS
48.1
-0.1
2
63.44
42.3

Associated Gene:

Gene:
DDR2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8578508 - 8583514
5007